Stem-loop sfr-mir-10455

Accession

MI0033546

Description

Spodoptera frugiperda sfr-mir-10455 precursor miRNA

Sequence

gucccccugcaagggggugacccugUUGGUCUCGGAUGUCUUUCuaaaucaaucaaaucuaugaugagaucuugcuacauaucgaccuuccuuggguauAGUUAGACGUCCGAGAUGuuucacggucuccccugaaaagggggac
((((((((....(((((.((((.((...(((((((((((((..(((.(((.((((......))))..)))..............((((.....)))).)))..)))))))))))))....)).)))).)))))....))))))))

Structure

        gcaa     u    c  -UUG             UU   ---------------------------a   -a    aa 
gucccccu    ggggg gacc ug    GUCUCGGAUGUCU  Cua                            auc  auca  u
||||||||    ||||| |||| ||    |||||||||||||  |||                            |||  ||||   
caggggga    ucccc cugg ac    UAGAGCCUGCAGA  GAu                            uag  uagu  c
        aaag     u    c  uuuG             UU   auggguuccuuccagcuauacaucguuc   ag    au 

Annotation confidence Not enough data

Genome context

JQCY02001588.1: 1284-1428 [-]

Mature sfr-miR-10455-5p

• Accession: MIMAT0041776
• Description: Spodoptera frugiperda sfr-miR-10455-5p mature miRNA
• Sequence: 26 - UUGGUCUCGGAUGUCUUUC - 44
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10455-3p

• Accession: MIMAT0041777
• Description: Spodoptera frugiperda sfr-miR-10455-3p mature miRNA
• Sequence: 100 - AGUUAGACGUCCGAGAUG - 117
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988