Stem-loop egr-mir-3479b

Accession

MI0033522

Description

Echinococcus granulosus egr-mir-3479b precursor miRNA

Literature search

2 open access papers mention egr-mir-3479b
(9 sentences)

Sequence

UGGCGGUGCGCGGCGCAAUUUCUGuuaacccgcucucuugggugcaGAUUGCACUACCCAUCGCCCACa
.(((((((.(.((.((((..(((((..(((((......)))))))))))))).)).).)))))))....

Structure

---U       C C  C    UU     ua     cu 
    GGCGGUG G GG GCAA  UCUGu  acccg  c
    ||||||| | || ||||  |||||  |||||   
    CCGCUAC C UC CGUU  AGacg  ugggu  u
aCAC       C A  A    --     --     uc 

Annotation confidence Not enough data

Genome context

APAU02000015.1: 733485-733553 [-]

Mature egr-miR-3479b-5p

• Accession: MIMAT0041730
• Description: Echinococcus granulosus egr-miR-3479b-5p mature miRNA
• Sequence: 1 - UGGCGGUGCGCGGCGCAAUUUCUG - 24
• Evidence: experimental ; Illumina [1]

Mature egr-miR-3479b-3p

• Accession: MIMAT0041731
• Description: Echinococcus granulosus egr-miR-3479b-3p mature miRNA
• Sequence: 47 - GAUUGCACUACCCAUCGCCCAC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83