Stem-loop ssc-mir-4331-2

Accession

MI0033415

Description

Sus scrofa ssc-mir-4331-2 precursor miRNA

Literature search

2 open access papers mention ssc-mir-4331-2
(46 sentences)

Sequence

57946 reads, 79.0 reads per million, 209 experiments

agcugUGGCGUAGAUCACAGACACAGCuuggaucugguguuGCUGUGGCUGUGGUGUAGGCcagcagcu
(((((((((.((.(((((((.((((((..............)))))).))))))).)).)))).)))))

Structure

     -    G  G       A      uuggau 
agcug UGGC UA AUCACAG CACAGC      c
||||| |||| || ||||||| ||||||       
ucgac acCG AU UGGUGUC GUGUCG      u
     g    G  G       G      uugugg 

Annotation confidence Medium

Genome context

chr14: 144183485-144183553 [+]

Mature ssc-miR-4331-5p

• Accession: MIMAT0037379
• Description: Sus scrofa ssc-miR-4331-5p mature miRNA
• Sequence: 6 - UGGCGUAGAUCACAGACACAGC - 27
• Evidence: experimental ; Illumina [3]

Mature ssc-miR-4331-3p

• Accession: MIMAT0017955
• Description: Sus scrofa ssc-miR-4331-3p mature miRNA
• Sequence: 42 - GCUGUGGCUGUGGUGUAGGC - 61
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252