miRBase entry: ssc-mir-6529

Stem-loop ssc-mir-6529


Accession
MI0033412
Description
Sus scrofa ssc-mir-6529 precursor miRNA


Sequence

3 reads, 7 reads per million, 3 experiments
accuguucucuuGAGAGAUCAGAGGCGCAGAGUgcgucaaugucagugaagccugugccuuuuaccucuuuaagagcgcacggu
((((((.((((((((((...((((((((((...((.(((.......))).))))))))))))...))).))))))).))).)))

Structure
   -   u       -   AUC          AGU  g   au 
acc ugu cucuuGA GAG   AGAGGCGCAG   gc uca  g
||| ||| ||||||| |||   ||||||||||   || |||  u
ugg acg gagaauu cuc   uuuccguguc   cg agu  c
   c   c       u   cau          ---  a   ga 


Annotation confidence Not enough data
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Genome context
chr13: 149441289-149441372 [+]

Database links

Mature ssc-miR-6529

Accession MIMAT0041611
Description Sus scrofa ssc-miR-6529 mature miRNA
Sequence 13 - GAGAGAUCAGAGGCGCAGAGU - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25230983
    The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
    "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
    "J Appl Genet (2015) 56:239-252