Stem-loop ssc-mir-6529

Accession

MI0033412

Description

Sus scrofa ssc-mir-6529 precursor miRNA

Sequence

3 reads, 4 reads per million, 3 experiments

accuguucucuuGAGAGAUCAGAGGCGCAGAGUgcgucaaugucagugaagccugugccuuuuaccucuuuaagagcgcacggu
((((((.((((((((((...((((((((((...((.(((.......))).))))))))))))...))).))))))).))).)))

Structure

   -   u       -   AUC          AGU  g   au 
acc ugu cucuuGA GAG   AGAGGCGCAG   gc uca  g
||| ||| ||||||| |||   ||||||||||   || |||  u
ugg acg gagaauu cuc   uuuccguguc   cg agu  c
   c   c       u   cau          ---  a   ga 

Annotation confidence Not enough data

Genome context

chr13: 149441289-149441372 [+]

Mature ssc-miR-6529

• Accession: MIMAT0041611
• Description: Sus scrofa ssc-miR-6529 mature miRNA
• Sequence: 13 - GAGAGAUCAGAGGCGCAGAGU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252