miRBase entry: ssc-mir-10390

Stem-loop ssc-mir-10390


Accession
MI0033404
Description
Sus scrofa ssc-mir-10390 precursor miRNA


Sequence

acuAUACUACUGACAGACCGCAACCUgaacacaaccuuuuuugauccagcaggugguacagggugccgaugucuuugugguuuguugaguauagu
((((((((...((((((((((((((((....(((......)))......)))))(((((...)))))........))))))))))).))))))))

Structure
        ACU           ---------------------     --aaca   cc 
acuAUACU   GACAGACCGCA                     ACCUg      caa  u
||||||||   |||||||||||                     |||||      |||   
ugauauga   uuguuuggugu                     uggac      guu  u
        --g           uucuguagccgugggacaugg     gaccua   uu 


Annotation confidence Not enough data
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Genome context
chr9: 5427130-5427224 [-]

Database links

Mature ssc-miR-10390

Accession MIMAT0041603
Description Sus scrofa ssc-miR-10390 mature miRNA
Sequence 4 - AUACUACUGACAGACCGCAACCU - 26
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25230983
    The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
    "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
    "J Appl Genet (2015) 56:239-252