Stem-loop ssc-mir-1842

Accession

MI0033396

Description

Sus scrofa ssc-mir-1842 precursor miRNA

Sequence

gccugggguucugauguggcggugggcaacgugagggcagccagcaccugugagguugguggugcugacgUUGGCUCUGCGAGGUCGGCUcaaggu
((((.(((..(((((.(.((((.((.((((((.((.((.((((((..(...)..)))))).)).)).)))))).)))))).).)))))))).))))

Structure

    g   uu     g g    u  g      g  g  a      ac u 
gccu ggg  cugau u gcgg gg caacgu ag gc gccagc  c  
|||| |||  ||||| | |||| || |||||| || || ||||||  | g
ugga cUC  GGCUG A CGUC UC GUUgca uc ug ugguug  g  
    a   --     G G    -  G      g  g  g      ga u 

Annotation confidence Not enough data

Genome context

chr3: 42401522-42401617 [-]

Mature ssc-miR-1842

• Accession: MIMAT0041594
• Description: Sus scrofa ssc-miR-1842 mature miRNA
• Sequence: 71 - UUGGCUCUGCGAGGUCGGCU - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252