Stem-loop ssc-mir-10384-2

Accession

MI0033395

Description

Sus scrofa ssc-mir-10384-2 precursor miRNA

Sequence

40369 reads, 23.0 reads per million, 189 experiments

uuucagcCCCUGCGUGGCUUCUCUGUGCAgucuuuucuucugggaccugCACAGGAAGGCCACGGAGGGGCcggag
.(((.((((((.((((((((.(((((((((((((.......)))).))))))))).)))))))).)))))).))).

Structure

u   a      G        C         -    uu 
 uuc gcCCCU CGUGGCUU UCUGUGCAg ucuu  c
 ||| |||||| |||||||| ||||||||| ||||  u
 agg CGGGGA GCACCGGA GGACACguc aggg  u
g   c      G        A         c    uc 

Annotation confidence High

Genome context

chrUScaf2076: 80978-81053 [+]

Mature ssc-miR-10384-5p

• Accession: MIMAT0041592
• Description: Sus scrofa ssc-miR-10384-5p mature miRNA
• Sequence: 8 - CCCUGCGUGGCUUCUCUGUGCA - 29
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-10384-3p

• Accession: MIMAT0052715
• Description: Sus scrofa ssc-miR-10384-3p mature miRNA
• Sequence: 50 - CACAGGAAGGCCACGGAGGGGC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252