Stem-loop ssc-mir-10383

Accession

MI0033393

Description

Sus scrofa ssc-mir-10383 precursor miRNA

Sequence

29601 reads, 37.0 reads per million, 149 experiments

gcccacAGCCAGGGCUGCAGGCACUGAcauucacccaugguauugUGGUGCCUGACGUCUUGGCAGUgggc
((((((.((((((((..((((((((.(((.(.(((...)))).)))))))))))..)))))))).))))))

Structure

      A        UG        G   u c   c 
gcccac GCCAGGGC  CAGGCACU Aca u acc  
|||||| ||||||||  |||||||| ||| | ||| a
cgggUG CGGUUCUG  GUCCGUGG Ugu a ugg  
      A        CA        -   u -   u 

Annotation confidence High

Genome context

chrUScaf4309: 1747-1817 [-]

Mature ssc-miR-10383-5p

• Accession: MIMAT0052714
• Description: Sus scrofa ssc-miR-10383-5p mature miRNA
• Sequence: 7 - AGCCAGGGCUGCAGGCACUGA - 27
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-10383-3p

• Accession: MIMAT0041591
• Description: Sus scrofa ssc-miR-10383-3p mature miRNA
• Sequence: 46 - UGGUGCCUGACGUCUUGGCAGU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252