Stem-loop egr-mir-10282

Accession

MI0033173

Description

Echinococcus granulosus egr-mir-10282 precursor miRNA

Sequence

GGGGAGGCGACGCUAGGGAAUAAguaauuaggcuuGUCCCUUUAUUCGUCUUCCUGU
((((((((((....(((((.(((((......))))))))))....))))))))))..

Structure

--          CGCU     A     aa 
  GGGGAGGCGA    AGGGA UAAgu  u
  ||||||||||    ||||| |||||   
  UCCUUCUGCU    UCCCU Guucg  u
UG          UAUU     -     ga 

Annotation confidence Not enough data

Genome context

APAU02000082.1: 231167-231223 [+]

Mature egr-miR-10282-5p

• Accession: MIMAT0041313
• Description: Echinococcus granulosus egr-miR-10282-5p mature miRNA
• Sequence: 1 - GGGGAGGCGACGCUAGGGAAUAA - 23
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10282-3p

• Accession: MIMAT0041314
• Description: Echinococcus granulosus egr-miR-10282-3p mature miRNA
• Sequence: 36 - GUCCCUUUAUUCGUCUUCCUGU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736