Stem-loop egr-mir-10278

Accession

MI0033169

Description

Echinococcus granulosus egr-mir-10278 precursor miRNA

Sequence

ACUGAGGGCGGUAGUGUUUuuuucguugaccaucaaugaaauuggaugugguugggaaugagagACACUCACCGCUUUUUAGAGC
.(((((((((((((((((((((...((((((((((((...))))...))))))))....)))))))))).))))).))))))...

Structure

--A      -     -          -ucg        ---    g 
   CUGAGG GCGGU AGUGUUUuuu    uugaccau   caau  
   |||||| ||||| ||||||||||    ||||||||   |||| a
   GAUUUU CGCCA UCACAgagag    gguuggug   guua  
CGA      U     C          uaag        uag    a 

Annotation confidence Not enough data

Genome context

APAU02000024.1: 180610-180694 [-]

Mature egr-miR-10278-5p

• Accession: MIMAT0041305
• Description: Echinococcus granulosus egr-miR-10278-5p mature miRNA
• Sequence: 1 - ACUGAGGGCGGUAGUGUUU - 19
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10278-3p

• Accession: MIMAT0041306
• Description: Echinococcus granulosus egr-miR-10278-3p mature miRNA
• Sequence: 65 - ACACUCACCGCUUUUUAGAGC - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736