Stem-loop egr-mir-10265

Accession

MI0033156

Description

Echinococcus granulosus egr-mir-10265 precursor miRNA

Sequence

UGUGGGCAAAGUGAGUGGGAUCaaacauuaugucaacauaugaaacauugggaaaUCUCAUGCCUUUGCCCACGAA
(((((((((((.(.(((((((....((.....(((.....))).....))....))))))).))))))))))))..

Structure

--           U A       Caaa  uuaug   a 
  UGUGGGCAAAG G GUGGGAU    ca     uca c
  ||||||||||| | |||||||    ||     ||| a
  GCACCCGUUUC C UACUCUa    gu     agu u
AA           - G       aagg  uacaa   a 

Annotation confidence Not enough data

Genome context

APAU02000008.1: 1500491-1500566 [-]

Mature egr-miR-10265-5p

• Accession: MIMAT0041279
• Description: Echinococcus granulosus egr-miR-10265-5p mature miRNA
• Sequence: 1 - UGUGGGCAAAGUGAGUGGGAUC - 22
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10265-3p

• Accession: MIMAT0041280
• Description: Echinococcus granulosus egr-miR-10265-3p mature miRNA
• Sequence: 56 - UCUCAUGCCUUUGCCCACGAA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736