Stem-loop egr-mir-10245

Accession

MI0033134

Description

Echinococcus granulosus egr-mir-10245 precursor miRNA

Sequence

gguggCGUGGAGGAGUUCGGGAUAGCccuuucgugugagUGUUCCGUCUCCUCCACAUCuuccu
((.((.(((((((((..(((((((..((......).)..))))))).))))))))).))..)).

Structure

-  -u  C         UU       GC - uu 
 gg  gg GUGGAGGAG  CGGGAUA  c c  u
 ||  || |||||||||  |||||||  | |   
 cc  CU CACCUCCUC  GCCUUGU  g g  c
u  uu  A         -U       ga u ug 

Annotation confidence Not enough data

Genome context

APAU02000001.1: 2752425-2752488 [-]

Mature egr-miR-10245-5p

• Accession: MIMAT0041235
• Description: Echinococcus granulosus egr-miR-10245-5p mature miRNA
• Sequence: 6 - CGUGGAGGAGUUCGGGAUAGC - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10245-3p

• Accession: MIMAT0041236
• Description: Echinococcus granulosus egr-miR-10245-3p mature miRNA
• Sequence: 40 - UGUUCCGUCUCCUCCACAUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736