Stem-loop egr-mir-10234

Accession

MI0033122

Description

Echinococcus granulosus egr-mir-10234 precursor miRNA

Sequence

uugacGGCGACAGACGAUAAUAGACaggucgacaaguaaugacuucagcuuguCUAUUAGUCAUCUGUCUCAUUcuuuc
..((..(.((((((.((((((((((((((.((..(((....))))).))))))))))).))).)))))).)..))....

Structure

--uu  cG C      C   -           c  ca   a 
    ga  G GACAGA GAU AAUAGACaggu ga  agu a
    ||  | |||||| ||| ||||||||||| ||  |||  
    cU  C CUGUCU CUG UUAUCuguucg cu  uca u
cuuu  UA U      A   A           a  --   g 

Annotation confidence Low

Genome context

APAU02000076.1: 289314-289392 [-]

Mature egr-miR-10234-5p

• Accession: MIMAT0041211
• Description: Echinococcus granulosus egr-miR-10234-5p mature miRNA
• Sequence: 6 - GGCGACAGACGAUAAUAGAC - 25
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10234-3p

• Accession: MIMAT0041212
• Description: Echinococcus granulosus egr-miR-10234-3p mature miRNA
• Sequence: 54 - CUAUUAGUCAUCUGUCUCAUU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736