Stem-loop egr-mir-10230

Accession

MI0033118

Description

Echinococcus granulosus egr-mir-10230 precursor miRNA

Sequence

gcauuUAUAUCAAAACGUCAGGUUUugguggaaaagaaAACAUGGCGUUUUGGUAAGAaugcu
((((((.(((((((((((((.(((((..........))))).))))))))))))).)))))).

Structure

-      A             G     ggug 
 gcauuU UAUCAAAACGUCA GUUUu    g
 |||||| ||||||||||||| |||||     
 cguaAG AUGGUUUUGCGGU CAAaa    a
u      A             A     gaaa 

Annotation confidence Not enough data

Genome context

APAU02000006.1: 101250-101312 [-]

Mature egr-miR-10230-5p

• Accession: MIMAT0041203
• Description: Echinococcus granulosus egr-miR-10230-5p mature miRNA
• Sequence: 6 - UAUAUCAAAACGUCAGGUUU - 25
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10230-3p

• Accession: MIMAT0041204
• Description: Echinococcus granulosus egr-miR-10230-3p mature miRNA
• Sequence: 39 - AACAUGGCGUUUUGGUAAGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736