Stem-loop cgr-mir-3068

Accession

MI0033088

Description

Cricetulus griseus cgr-mir-3068 precursor miRNA

Sequence

15375 reads, 63.0 reads per million, 55 experiments

gcgagaguaaUUGGAGUUCAUGCAAGUUCUAACCAgcuuaaucaguagcugGGUGAAUUGCAGUACUCCAACAuucugu
...(((((..(((((((...(((((.(((...((((((........))))))..))))))))..))))))).)))))..

Structure

gcg     aa       UCA     G   UAA      uaa 
   agagu  UUGGAGU   UGCAA UUC   CCAgcu   u
   |||||  |||||||   ||||| |||   ||||||    
   ucuuA  AACCUCA   ACGUU AAG   Ggucga   c
-ug     -C       -UG     -   -UG      uga 

Annotation confidence Medium

Genome context

JH000170.1: 1626276-1626354 [+]

Mature cgr-miR-3068-5p

• Accession: MIMAT0052500
• Description: Cricetulus griseus cgr-miR-3068-5p mature miRNA
• Sequence: 11 - UUGGAGUUCAUGCAAGUUCUAACCA - 35
• Evidence: not_experimental

Mature cgr-miR-3068-3p

• Accession: MIMAT0041159
• Description: Cricetulus griseus cgr-miR-3068-3p mature miRNA
• Sequence: 52 - GGUGAAUUGCAGUACUCCAACA - 73
• Evidence: not_experimental

References

1. PubMed ID: 25689160
   Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
   "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
   "Biotechnol Bioeng (2015) 112:1488-1493