Stem-loop eun-MIR397b

Accession

MI0033028

Description

Eugenia uniflora eun-MIR397b precursor miRNA

Literature search

1 open access papers mention eun-MIR397b
(1 sentences)

Sequence

acauagaaacauaauugagUGCAGCGCUGUCGAAACCGAUcccgaucccagugcugggccaucaagcaagaaaucccggagacggggaaccgguuucaUCAACGCUGCACUCAAUGAUGuuucugg
...(((((((((.(((((((((((((.((..(((((((.....(.((((.((.(((((...((......))...)))))..)).)))).))))))))..)).))))))))))))).))))))))).

Structure

aca         a             C  UC       AUccc a    a  -g     cca  aa 
   uagaaacau auugagUGCAGCG UG  GAAACCG     g uccc gu  cuggg   uc  g
   ||||||||| ||||||||||||| ||  |||||||     | |||| ||  |||||   ||   
   gucuuuGUA UAACUCACGUCGC AC  cuuuggc     c aggg ca  ggccc   ag  c
--g         G             A  Ua       ----- a    g  ga     uaa  aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature eun-miR397b-5p

• Accession: MIMAT0041080
• Description: Eugenia uniflora eun-miR397b-5p mature miRNA
• Sequence: 20 - UGCAGCGCUGUCGAAACCGAU - 40
• Evidence: experimental ; Illumina [1]

Mature eun-miR397b-3p

• Accession: MIMAT0041081
• Description: Eugenia uniflora eun-miR397b-3p mature miRNA
• Sequence: 99 - UCAACGCUGCACUCAAUGAUG - 119
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23166775
   Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis
   Guzman F, Almerão MP, Körbes AP, Loss-Morais G, Margis R
   PLoS One (2012) 7:e49811