Stem-loop vca-MIR1432

Accession

MI0033011

Description

Vriesea carinata vca-MIR1432 precursor miRNA

Sequence

ccuuugUCAGGAGAGAUGACACCCAcaucggaggaccggguuaccguucggagugGGUGUCACCUCUCCUGGACauggg
(((.(((((((((((.((((((((((.(((((....(((....)))))))).)))))))))).))))))).)))).)))

Structure

   u    -       A          a     ggac   g 
ccu ugUC AGGAGAG UGACACCCAc ucgga    cgg u
||| |||| ||||||| |||||||||| |||||    |||  
ggg aCAG UCCUCUC ACUGUGGgug ggcuu    gcc u
   u    G       C          a     ----   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR1432-5p

• Accession: MIMAT0041049
• Description: Vriesea carinata vca-miR1432-5p mature miRNA
• Sequence: 7 - UCAGGAGAGAUGACACCCA - 25
• Evidence: experimental ; Illumina [1]

Mature vca-miR1432-3p

• Accession: MIMAT0041050
• Description: Vriesea carinata vca-miR1432-3p mature miRNA
• Sequence: 56 - GGUGUCACCUCUCCUGGAC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223