miRBase entry: vca-MIR391

Stem-loop vca-MIR391


Accession
MI0033008
Description
Vriesea carinata vca-MIR391 precursor miRNA


Sequence

gguuuccUUCGCAGGAGAGAUGAUGCCGuccccuauuauuauuauuauaauaaggauacgGCAUCGUCUCUCCGGCGACGGuaacc
((((.((.((((.((((((((((((((((..(((..((((((....)))))))))..)))))))))))))))).)))).)).))))

Structure
    u  U    A                cc   au      u 
gguu cc UCGC GGAGAGAUGAUGCCGu  ccu  uauuau a
|||| || |||| ||||||||||||||||  |||  ||||||  
ccaa GG AGCG CCUCUCUGCUACGgca  gga  auaaua u
    u  C    G                ua   --      u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature vca-miR391-5p

Accession MIMAT0041043
Description Vriesea carinata vca-miR391-5p mature miRNA
Sequence 8 - UUCGCAGGAGAGAUGAUGCCG - 28
Evidence experimental
Illumina [1]

Mature vca-miR391-3p

Accession MIMAT0041044
Description Vriesea carinata vca-miR391-3p mature miRNA
Sequence 61 - GCAUCGUCUCUCCGGCGACGG - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23849128
    Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
    "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
    "Plant Sci (2013) 210:214-223