Stem-loop vca-MIR391

Accession

MI0033008

Description

Vriesea carinata vca-MIR391 precursor miRNA

Sequence

gguuuccUUCGCAGGAGAGAUGAUGCCGuccccuauuauuauuauuauaauaaggauacgGCAUCGUCUCUCCGGCGACGGuaacc
((((.((.((((.((((((((((((((((..(((..((((((....)))))))))..)))))))))))))))).)))).)).))))

Structure

    u  U    A                cc   au      u 
gguu cc UCGC GGAGAGAUGAUGCCGu  ccu  uauuau a
|||| || |||| ||||||||||||||||  |||  ||||||  
ccaa GG AGCG CCUCUCUGCUACGgca  gga  auaaua u
    u  C    G                ua   --      u 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR391-5p

• Accession: MIMAT0041043
• Description: Vriesea carinata vca-miR391-5p mature miRNA
• Sequence: 8 - UUCGCAGGAGAGAUGAUGCCG - 28
• Evidence: experimental ; Illumina [1]

Mature vca-miR391-3p

• Accession: MIMAT0041044
• Description: Vriesea carinata vca-miR391-3p mature miRNA
• Sequence: 61 - GCAUCGUCUCUCCGGCGACGG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223