Stem-loop vca-MIR10208

Accession

MI0033006

Description

Vriesea carinata vca-MIR10208 precursor miRNA

Sequence

caaauuugguguaccgaaUAGGUGCUCCGAAUCAUCUAGGccuuuagcuuuuguuuuacaagcuacagauuuagaugaUUCAGAGCAUCUGUUCAGUGCuccaaaguug
(((.(((((.((((.((((((((((((.((((((((((((.((.((((((.........)))))).)).)))))))))))).)))))))))))).)))).))))).)))

Structure

   a     u    c            C            c  u      uug 
caa uuugg guac gaaUAGGUGCUC GAAUCAUCUAGG cu uagcuu   u
||| ||||| |||| |||||||||||| |||||||||||| || ||||||   u
guu aaacc CGUG CUUGUCUACGAG CUUaguagauuu ga aucgaa   u
   g     u    A            A            a  c      cau 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR10208-3p

• Accession: MIMAT0041039
• Description: Vriesea carinata vca-miR10208-3p mature miRNA
• Sequence: 19 - UAGGUGCUCCGAAUCAUCUAGG - 40
• Evidence: experimental ; Illumina [1]

Mature vca-miR10208-5p

• Accession: MIMAT0041040
• Description: Vriesea carinata vca-miR10208-5p mature miRNA
• Sequence: 79 - UUCAGAGCAUCUGUUCAGUGC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223