Stem-loop vca-MIR10203

Accession

MI0033000

Description

Vriesea carinata vca-MIR10203 precursor miRNA

Sequence

agcaccaaggccuUUGUGCUUUUAGAAGCAUUCCGGCccauuuuuauauGGAUCGGAAUGCUUCUAAUAGCACcaagccauuggugcu
(((((((((((.((.(((((.(((((((((((((((.((((......)))).))))))))))))))).))))).))))).))))))))

Structure

        -   c  U     U               C    uu 
agcaccaa ggc uU GUGCU UUAGAAGCAUUCCGG ccau  u
|||||||| ||| || ||||| ||||||||||||||| ||||   
ucgugguu ccg aa CACGA AAUCUUCGUAAGGCU GGua  u
        a   -  c     U               A    ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR10203-5p

• Accession: MIMAT0041027
• Description: Vriesea carinata vca-miR10203-5p mature miRNA
• Sequence: 14 - UUGUGCUUUUAGAAGCAUUCCGGC - 37
• Evidence: experimental ; Illumina [1]

Mature vca-miR10203-3p

• Accession: MIMAT0041028
• Description: Vriesea carinata vca-miR10203-3p mature miRNA
• Sequence: 50 - GGAUCGGAAUGCUUCUAAUAGCAC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223