Stem-loop vca-MIR528

Accession

MI0032996

Description

Vriesea carinata vca-MIR528 precursor miRNA

Sequence

gUGGAAGGGGCAUGCAGAGGAGaggagagauccaaaacucuacccaggcccuguuuuucuUUUCCUGUGCUCGCCCCUUCCac
(((((((((((..(((.((((((((((((((((.............))....)))))))))))))).)))..)))))))))))

Structure

           AU   G              ----  aaaac 
gUGGAAGGGGC  GCA AGGAGaggagagau    cc     u
|||||||||||  ||| ||||||||||||||    ||     c
caCCUUCCCCG  CGU UCCUUUucuuuuug    gg     u
           CU   G              uccc  accca 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR528-5p

• Accession: MIMAT0041019
• Description: Vriesea carinata vca-miR528-5p mature miRNA
• Sequence: 2 - UGGAAGGGGCAUGCAGAGGAG - 22
• Evidence: experimental ; Illumina [1]

Mature vca-miR528-3p

• Accession: MIMAT0041020
• Description: Vriesea carinata vca-miR528-3p mature miRNA
• Sequence: 61 - UUUCCUGUGCUCGCCCCUUCC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223