Stem-loop vca-MIR168b

Accession

MI0032989

Description

Vriesea carinata vca-MIR168b precursor miRNA

Sequence

auUCGCUUGGUGCAGGUCGGGAAcgcccuccgaucgccgccgacgccgcccccugaucgugcccgcuuuCCCGCCUUGCACCAACUGAAU
(((((.((((((((((.((((((.((...((((((((.((....)).)).....))))).)...)).)))))).)))))))))).)))))

Structure

     C          U      c  ccu -     -----  c  c 
auUCG UUGGUGCAGG CGGGAA gc   c cgauc     gc gc g
||||| |||||||||| |||||| ||   | |||||     || ||  
UAAGU AACCACGUUC GCCCuu cg   g gcuag     cg cg a
     C          C      u  ccc u     ucccc  c  c 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR168b-5p

• Accession: MIMAT0041005
• Description: Vriesea carinata vca-miR168b-5p mature miRNA
• Sequence: 3 - UCGCUUGGUGCAGGUCGGGAA - 23
• Evidence: experimental ; Illumina [1]

Mature vca-miR168b-3p

• Accession: MIMAT0041006
• Description: Vriesea carinata vca-miR168b-3p mature miRNA
• Sequence: 70 - CCCGCCUUGCACCAACUGAAU - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223