Stem-loop vca-MIR168a

Accession

MI0032988

Description

Vriesea carinata vca-MIR168a precursor miRNA

Sequence

cucggauUCGCUUGGUGCAGGUCGGGAAcggcucgauuucucgcucucuccacggcgagccggaUCCCGGCUUGCACCAACUGAAucggag
(((.((((((.((((((((((((((((.(((((((....................)))))))..)))))))))))))))).)))))).)))

Structure

   g      C                -A       auuucucgc 
cuc gauUCG UUGGUGCAGGUCGGGA  cggcucg         u
||| |||||| ||||||||||||||||  |||||||          
gag cuAAGU AACCACGUUCGGCCCU  gccgagc         c
   g      C                ag       ggcaccucu 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR168a-5p

• Accession: MIMAT0041003
• Description: Vriesea carinata vca-miR168a-5p mature miRNA
• Sequence: 8 - UCGCUUGGUGCAGGUCGGGAA - 28
• Evidence: experimental ; Illumina [1]

Mature vca-miR168a-3p

• Accession: MIMAT0041004
• Description: Vriesea carinata vca-miR168a-3p mature miRNA
• Sequence: 65 - UCCCGGCUUGCACCAACUGAA - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223