Stem-loop vca-MIR167b

Accession

MI0032987

Description

Vriesea carinata vca-MIR167b precursor miRNA

Sequence

agcggcUGAAGCUGCCAGCAUGAUCUGAucucucucucucucucucucucucucucucuccuccccuuuuaggguuaauaucAGAUCAUGUUGCAGUUUCAUCugcu
(((((.(((((((((.(((((((((((((....((((.................................)))).....)))))))))))))))))))))).)))))

Structure

     c         C             -cucu    cucucucucucucuc 
agcgg UGAAGCUGC AGCAUGAUCUGAu     cucu               u
||||| ||||||||| |||||||||||||     ||||               c
ucguC ACUUUGACG UUGUACUAGAcua     ggga               u
     U         -             uaauu    uuuuccccuccucuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR167b-5p

• Accession: MIMAT0041001
• Description: Vriesea carinata vca-miR167b-5p mature miRNA
• Sequence: 7 - UGAAGCUGCCAGCAUGAUCUGA - 28
• Evidence: experimental ; Illumina [1]

Mature vca-miR167b-3p

• Accession: MIMAT0041002
• Description: Vriesea carinata vca-miR167b-3p mature miRNA
• Sequence: 83 - AGAUCAUGUUGCAGUUUCAUC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223