Stem-loop vca-MIR167a

Accession

MI0032986

Description

Vriesea carinata vca-MIR167a precursor miRNA

Sequence

aguagaUGAAGCUGCCAGCAUGAUCUGAccaucucucuuucucucucucucucucucuaaaagagaagagggaacuauCAGAUCAUGUGGCAGUUUCAUcugcu
(((((((((((((((((.((((((((((...((((((((.((((.................))))))))))))....)))))))))))))))))))))))))))

Structure

                 G          -cca        u    cucucuc 
aguagaUGAAGCUGCCA CAUGAUCUGA    ucucucuu cucu       u
||||||||||||||||| ||||||||||    |||||||| ||||       c
ucgucUACUUUGACGGU GUACUAGACu    agggagaa gaga       u
                 -          auca        -    aaaucuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR167a-5p

• Accession: MIMAT0040999
• Description: Vriesea carinata vca-miR167a-5p mature miRNA
• Sequence: 7 - UGAAGCUGCCAGCAUGAUCUGA - 28
• Evidence: experimental ; Illumina [1]

Mature vca-miR167a-3p

• Accession: MIMAT0041000
• Description: Vriesea carinata vca-miR167a-3p mature miRNA
• Sequence: 79 - CAGAUCAUGUGGCAGUUUCAU - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223