Stem-loop vca-MIR166a

Accession

MI0032983

Description

Vriesea carinata vca-MIR166a precursor miRNA

Sequence

ggGGAAUGUUGUCUGGUUCGAAAccauugacgcgaagagcacgcuucgauagucuccucgacggcaugaaugguuUCGGACCAGGCUUCAUUCCCC
((((((((..((((((((((((((((((..(((((.(((.((.........))))).))).)).....))))))))))))))))))..))))))))

Structure

        UU                  ---ga  -   a   c  gcu 
ggGGAAUG  GUCUGGUUCGAAAccauu     cg cga gag ac   u
||||||||  ||||||||||||||||||     || ||| ||| ||   c
CCCCUUAC  CGGACCAGGCUuugguaa     gc gcu cuc ug   g
        UU                  guacg  a   c   -  aua 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR166a-5p

• Accession: MIMAT0040993
• Description: Vriesea carinata vca-miR166a-5p mature miRNA
• Sequence: 3 - GGAAUGUUGUCUGGUUCGAAA - 23
• Evidence: experimental ; Illumina [1]

Mature vca-miR166a-3p

• Accession: MIMAT0040994
• Description: Vriesea carinata vca-miR166a-3p mature miRNA
• Sequence: 76 - UCGGACCAGGCUUCAUUCCCC - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223