Stem-loop vca-MIR160

Accession

MI0032982

Description

Vriesea carinata vca-MIR160 precursor miRNA

Sequence

ggugagggucUGCCUGGCUCCCUGAAUGCCAucugagaagcuuuugucaaagguguugaugaacuuguugguuggcaucaggggcgccaugcaggccuuuucu
((.((((((((((.(((((((((((.(((((.((((.(((..((((((((.....))))))))))).)))).)))))))))))).)))).)))))))))).))

Structure

  u          C    -       A     u    g   cu        a 
gg gagggucUGC UGGC UCCCUGA UGCCA cuga aag  uuugucaa g
|| |||||||||| |||| ||||||| ||||| |||| |||  |||||||| g
uc uuuccggacg accg ggggacu acggu gguu uuc  aaguaguu u
  u          u    c       -     u    g   --        g 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR160-5p

• Accession: MIMAT0040992
• Description: Vriesea carinata vca-miR160-5p mature miRNA
• Sequence: 11 - UGCCUGGCUCCCUGAAUGCCA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223