Stem-loop vca-MIR156b

Accession

MI0032980

Description

Vriesea carinata vca-MIR156b precursor miRNA

Sequence

ugUUGACAGAAGAUAGAGAGCACagaugaugagaugcaugaugcgaugcaccucacuucuuuguGCUCUCUAUGCUUCUGUCAUCa
((.(((((((((((((((((((((((.((((((.(((((......))))).))))..)))))))))))))))).))))))))).))

Structure

  U         -              u  --    a     ga 
ug UGACAGAAG AUAGAGAGCACaga ga  ugag ugcau  u
|| ||||||||| |||||||||||||| ||  |||| |||||   
aC ACUGUCUUC UAUCUCUCGuguuu cu  acuc acgua  g
  U         G              -  uc    c     gc 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR156b-5p

• Accession: MIMAT0040988
• Description: Vriesea carinata vca-miR156b-5p mature miRNA
• Sequence: 3 - UUGACAGAAGAUAGAGAGCAC - 23
• Evidence: experimental ; Illumina [1]

Mature vca-miR156b-3p

• Accession: MIMAT0040989
• Description: Vriesea carinata vca-miR156b-3p mature miRNA
• Sequence: 65 - GCUCUCUAUGCUUCUGUCAUC - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223