Stem-loop ttv-mir-T1

Accession

MI0032971

Description

Torque teno virus ttv-mir-T1 precursor miRNA

Sequence

ccgccaucuuaAGUAGUUGAGGCGGACGGUGGCgugaguucaaagguCACCAUCAGCCACACCUACUCAaaauggugg
(((((((.((.(((((.((.(((.((.((((((.(........).)))))).)).))).)).))))).)).)))))))

Structure

       c  a     U  A   G  C      g gag 
ccgccau uu AGUAG UG GGC GA GGUGGC u   u
||||||| || ||||| || ||| || |||||| |    
gguggua aA UCAUC AC CCG CU CCACug a   u
       a  C     C  A   A  A      g aac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ttv-miR-T1-5p

• Accession: MIMAT0040971
• Description: Torque teno virus ttv-miR-T1-5p mature miRNA
• Sequence: 12 - AGUAGUUGAGGCGGACGGUGGC - 33
• Evidence: experimental ; Illumina [1]

Mature ttv-miR-T1-3p

• Accession: MIMAT0040972
• Description: Torque teno virus ttv-miR-T1-3p mature miRNA
• Sequence: 48 - CACCAUCAGCCACACCUACUCA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24367263
   A human torque teno virus encodes a microRNA that inhibits interferon signaling
   Kincaid RP, Burke JM, Cox JC, de Villiers EM, Sullivan CS
   PLoS Pathog (2013) 9:e1003818