Stem-loop hpo-mir-10158b

Accession

MI0032910

Description

Heligmosomoides polygyrus hpo-mir-10158b precursor miRNA

Sequence

aagcucaucgccUCCCAUCCGAUCGGCAGUCGACGccgagauaagcgGGGACGACGAGAUGGCCAGGcacccggcug
.((((....((((.(((((...(((...(((..(((........)))..)))..))))))))..))))....)))).

Structure

a    cauc    -C     CGA   GCA   GA   cga 
 agcu    gccU  CCAUC   UCG   GUC  CGc   g
 ||||    ||||  |||||   |||   |||  |||    
 ucgg    cGGA  GGUAG   AGC   CAG  gcg   a
g    ccca    CC     ---   -AG   GG   aau 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_96195: 282-358 [+]

Mature hpo-miR-10158b-5p

• Accession: MIMAT0040902
• Description: Heligmosomoides polygyrus hpo-miR-10158b-5p mature miRNA
• Sequence: 13 - UCCCAUCCGAUCGGCAGUCGACG - 35
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10158b-3p

• Accession: MIMAT0040903
• Description: Heligmosomoides polygyrus hpo-miR-10158b-3p mature miRNA
• Sequence: 48 - GGGACGACGAGAUGGCCAGG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488