Stem-loop hpo-mir-10156b

Accession

MI0032908

Description

Heligmosomoides polygyrus hpo-mir-10156b precursor miRNA

Sequence

uagcaaugacGCUCCUUUGUGCUAUUGUUAUGcacaaaugacacaACAAUAGCACAAAGGAGCGUCAcugccacaau
..(((.(((((((((((((((((((((((.((((....)).)).))))))))))))))))))))))).)))......

Structure

----ua   a                       A  -  c 
      gca ugacGCUCCUUUGUGCUAUUGUU UG ca a
      ||| ||||||||||||||||||||||| || ||  
      cgu ACUGCGAGGAAACACGAUAACAa ac gu a
uaacac   c                       c  a  a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_72958: 1281-1357 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hpo-mir-10156b

Mature hpo-miR-10156b-5p

• Accession: MIMAT0040898
• Description: Heligmosomoides polygyrus hpo-miR-10156b-5p mature miRNA
• Sequence: 11 - GCUCCUUUGUGCUAUUGUUAUG - 32
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10156b-3p

• Accession: MIMAT0040899
• Description: Heligmosomoides polygyrus hpo-miR-10156b-3p mature miRNA
• Sequence: 46 - ACAAUAGCACAAAGGAGCGUCA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488