Stem-loop hpo-mir-10152

Accession

MI0032902

Description

Heligmosomoides polygyrus hpo-mir-10152 precursor miRNA

Sequence

UACGGUCGGGCAUGGGUGAAguuauuguuggaugugccgcuggugcuccagcugauuCUACUGCGGCUGCUGGACCGGCA
..(((((.((((..((((.(((((..((((((.(((((...)))))))))))))))).)))).....)))).)))))...

Structure

-UA     G    ---UG    A     uu      u     g 
   CGGUC GGCA     GGUG Aguua  guugga gugcc  
   ||||| ||||     |||| |||||  |||||| ||||| c
   GCCAG UCGU     UCAU uuagu  cgaccu cgugg  
ACG     G    CGGCG    C     --      -     u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_40964: 2276-2355 [-]

Mature hpo-miR-10152-5p

• Accession: MIMAT0040886
• Description: Heligmosomoides polygyrus hpo-miR-10152-5p mature miRNA
• Sequence: 1 - UACGGUCGGGCAUGGGUGAA - 20
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10152-3p

• Accession: MIMAT0040887
• Description: Heligmosomoides polygyrus hpo-miR-10152-3p mature miRNA
• Sequence: 58 - CUACUGCGGCUGCUGGACCGGCA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488