Stem-loop hpo-mir-10147

Accession

MI0032897

Description

Heligmosomoides polygyrus hpo-mir-10147 precursor miRNA

Sequence

GACGACCUAAGCCGGACGACUUcgguGACCUCGGGCUAAGGCGUAG
.(((.(((.((((.((..((....))....)).)))).))))))..

Structure

-G   A   A    G  --CG  U 
  ACG CCU AGCC GA    AC U
  ||| ||| |||| ||    ||  
  UGC GGA UCGG CU    ug c
GA   -   A    G  CCAG  g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_25102: 1045-1090 [+]

Mature hpo-miR-10147-5p

• Accession: MIMAT0040876
• Description: Heligmosomoides polygyrus hpo-miR-10147-5p mature miRNA
• Sequence: 1 - GACGACCUAAGCCGGACGACUU - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10147-3p

• Accession: MIMAT0040877
• Description: Heligmosomoides polygyrus hpo-miR-10147-3p mature miRNA
• Sequence: 27 - GACCUCGGGCUAAGGCGUAG - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488