Stem-loop hpo-mir-10146

Accession

MI0032895

Description

Heligmosomoides polygyrus hpo-mir-10146 precursor miRNA

Sequence

uuuguuuagaAAGAUCUUCGUCGGUGGUAUcgcguacgauGUGCUGAAUGAAGAUCUUACcaaucauu
..........(((((((((((((((..(((((....))))).)))).)))))))))))..........

Structure

uuuguuuaga           -    GG     c 
          AAGAUCUUCGU CGGU  UAUcg g
          ||||||||||| ||||  |||||  
          UUCUAGAAGUA GUCG  Guagc u
uuacuaacCA           A    -U     a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_185978: 1083-1150 [-]

Mature hpo-miR-10146-5p

• Accession: MIMAT0040872
• Description: Heligmosomoides polygyrus hpo-miR-10146-5p mature miRNA
• Sequence: 11 - AAGAUCUUCGUCGGUGGUAU - 30
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10146-3p

• Accession: MIMAT0040873
• Description: Heligmosomoides polygyrus hpo-miR-10146-3p mature miRNA
• Sequence: 41 - GUGCUGAAUGAAGAUCUUAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488