Stem-loop hpo-mir-10144

Accession

MI0032893

Description

Heligmosomoides polygyrus hpo-mir-10144 precursor miRNA

Sequence

ggugaucagcuacugcgaggcaACGUUCACACCGGUCAUUCGCGACCAGgcggcgccaucGUUCGCGACGACCGGUAUACUUGucgcaaucac
.(((((.......((((..((((.((....(((((((..((((((.(.(((...)))...).)))))).)))))))..)))))))))))))))

Structure

g     cagcuac    ag    C  UCAC       AU      C --A   g 
 gugau       ugcg  gcaA GU    ACCGGUC  UCGCGA C   Ggc  
 |||||       ||||  |||| ||    |||||||  |||||| |   ||| g
 cacua       acgc  uGUU CA    UGGCCAG  AGCGCU G   ccg  
-     -------    --    -  --UA       -C      U cua   c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_143363: 538-630 [-]

Mature hpo-miR-10144-??

• Accession: MIMAT0040868
• Description: Heligmosomoides polygyrus hpo-miR-10144-?? mature miRNA
• Sequence: 23 - ACGUUCACACCGGUCAUUCGCGACCAG - 49
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10144-3p

• Accession: MIMAT0040869
• Description: Heligmosomoides polygyrus hpo-miR-10144-3p mature miRNA
• Sequence: 61 - GUUCGCGACGACCGGUAUACUUG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488