Stem-loop hpo-mir-10142

Accession

MI0032891

Description

Heligmosomoides polygyrus hpo-mir-10142 precursor miRNA

Sequence

AAUGGAACCCGGCUGCUGCUGCucccguccaguacccgCAGACACAGCAGUUUCCAUUCC
(((((((....(((((((((((...............))))...))))))))))))))..

Structure

--       CCCG       ---    ucccgu 
  AAUGGAA    GCUGCUG   CUGC      c
  |||||||    |||||||   ||||      c
  UUACCUU    UGACGAC   GACg      a
CC       ----       ACA    cccaug 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_11977: 427-486 [+]

Mature hpo-miR-10142-5p

• Accession: MIMAT0040864
• Description: Heligmosomoides polygyrus hpo-miR-10142-5p mature miRNA
• Sequence: 1 - AAUGGAACCCGGCUGCUGCUGC - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10142-3p

• Accession: MIMAT0040865
• Description: Heligmosomoides polygyrus hpo-miR-10142-3p mature miRNA
• Sequence: 39 - CAGACACAGCAGUUUCCAUUCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488