Stem-loop hpo-mir-10140

Accession

MI0032889

Description

Heligmosomoides polygyrus hpo-mir-10140 precursor miRNA

Sequence

uucuuccaauGCAGAGCUCUGCUGGUGAGCGAAguccauucggcguuugugucGGAGUUGAUCGGUAGGUAAGCAAgaauguuuga
...(((...(((...((.((((((((.(((........((((((......))))))))).))))))))))..))).))).......

Structure

----uuc   caa   AGA  U        G   GAAgucca      gu 
       uuc   uGC   GC CUGCUGGU AGC        uucggc  u
       |||   |||   || |||||||| |||        ||||||   
       aag   ACG   UG GAUGGCUA UUG        AGGcug  u
aguuugu   --A   -AA  -        G   --------      ug 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_147915: 300-385 [+]

Mature hpo-miR-10140-5p

• Accession: MIMAT0040860
• Description: Heligmosomoides polygyrus hpo-miR-10140-5p mature miRNA
• Sequence: 11 - GCAGAGCUCUGCUGGUGAGCGAA - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10140-3p

• Accession: MIMAT0040861
• Description: Heligmosomoides polygyrus hpo-miR-10140-3p mature miRNA
• Sequence: 54 - GGAGUUGAUCGGUAGGUAAGCAA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488