Stem-loop hpo-mir-10136

Accession

MI0032884

Description

Heligmosomoides polygyrus hpo-mir-10136 precursor miRNA

Sequence

GCUUUUCUGUUGCUUGGACAgucaaugucagaugauAAGAGCGGGUAGCUGGAGGCA
((((((..((((((((....((((........)))).....)))))))).)))))).

Structure

-      CU        -GACA    aug 
 GCUUUU  GUUGCUUG     guca   u
 ||||||  ||||||||     ||||    
 CGGAGG  CGAUGGGC     uagu   c
A      -U        GAGAA    aga 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_35809: 572-628 [-]

Mature hpo-miR-10136-5p

• Accession: MIMAT0040850
• Description: Heligmosomoides polygyrus hpo-miR-10136-5p mature miRNA
• Sequence: 1 - GCUUUUCUGUUGCUUGGACA - 20
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10136-3p

• Accession: MIMAT0040851
• Description: Heligmosomoides polygyrus hpo-miR-10136-3p mature miRNA
• Sequence: 37 - AAGAGCGGGUAGCUGGAGGCA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488