Stem-loop hpo-mir-10130

Accession

MI0032878

Description

Heligmosomoides polygyrus hpo-mir-10130 precursor miRNA

Sequence

ucgaaugagaUGCUGUACCACGCGUUCUCUCacuuuggcGAUGUGGAGCGCGCGGUGCACAuugucgacga
(((.....((((.((((((.((((((((.((.(....).))...)))))))).)))))))))).....)))

Structure

   aauga    C      A        --C  a u 
ucg     gaUG UGUACC CGCGUUCU   UC c u
|||     |||| |||||| ||||||||   || |  
agc     uuAC ACGUGG GCGCGAGG   AG g u
   agcug    -      C        UGU  c g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_52965: 6305-6375 [-]

Mature hpo-miR-10130-5p

• Accession: MIMAT0040839
• Description: Heligmosomoides polygyrus hpo-miR-10130-5p mature miRNA
• Sequence: 11 - UGCUGUACCACGCGUUCUCUC - 31
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10130-3p

• Accession: MIMAT0040840
• Description: Heligmosomoides polygyrus hpo-miR-10130-3p mature miRNA
• Sequence: 40 - GAUGUGGAGCGCGCGGUGCACA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488