Stem-loop hpo-mir-10126

Accession

MI0032874

Description

Heligmosomoides polygyrus hpo-mir-10126 precursor miRNA

Sequence

agcauagccgAGAACCAUUCGCGCUGCACAUUCAacacgagcgguugAAUUGAGCCGCAAUGGUUUUCGgucucggagc
......(((((((((((((((.(((.((.(((((((.......)))))))))))))).)))))))))))))........

Structure

--agcaua             -  C   G  C       ac 
        gccgAGAACCAUU CG GCU CA AUUCAac  g
        ||||||||||||| || ||| || |||||||  a
        ugGCUUUUGGUAA GC CGA GU UAAguug  g
cgaggcuc             C  -   -  -       gc 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_278211: 534-612 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from hpo-mir-10126

Mature hpo-miR-10126-5p

• Accession: MIMAT0040831
• Description: Heligmosomoides polygyrus hpo-miR-10126-5p mature miRNA
• Sequence: 11 - AGAACCAUUCGCGCUGCACAUUCA - 34
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10126-3p

• Accession: MIMAT0040832
• Description: Heligmosomoides polygyrus hpo-miR-10126-3p mature miRNA
• Sequence: 48 - AAUUGAGCCGCAAUGGUUUUCG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488