Stem-loop hpo-mir-10124

Accession

MI0032872

Description

Heligmosomoides polygyrus hpo-mir-10124 precursor miRNA

Sequence

cucacccguuGAAGCAUACGAAGGCGGAACCUCuccgacucccacugcuucggggcguuGAAUAUCCCUUGCCGUAGACUGAagccggacgu
....((.(((..((..((((.(((.(((...((..((.(.(((........))))))..))...))))))..))))..))..))).))....

Structure

cuca  c   GA  CA    -A   C   ACC  uc  a u   acu 
    cc guu  AG  UACG  AGG GGA   UC  cg c ccc   g
    || |||  ||  ||||  ||| |||   ||  || | |||    
    gg cga  UC  AUGC  UUC CCU   AG  gc g ggg   c
ugca  c   AG  AG    CG   -   AUA  uu  - -   cuu 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_342533: 341-432 [+]

Mature hpo-miR-10124-5p

• Accession: MIMAT0040827
• Description: Heligmosomoides polygyrus hpo-miR-10124-5p mature miRNA
• Sequence: 11 - GAAGCAUACGAAGGCGGAACCUC - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10124-3p

• Accession: MIMAT0040828
• Description: Heligmosomoides polygyrus hpo-miR-10124-3p mature miRNA
• Sequence: 60 - GAAUAUCCCUUGCCGUAGACUGA - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488