Stem-loop hpo-mir-10123

Accession

MI0032871

Description

Heligmosomoides polygyrus hpo-mir-10123 precursor miRNA

Sequence

UUUCGAAUGAUCGACAUAACUCaguaucaguuaUUUCGCUCACCCGAAAAUCCAGU
(((((..(((.(((.((((((.......)))))).))).)))..))))).......

Structure

-------     AA   U   C      Ca 
       UUUCG  UGA CGA AUAACU  g
       |||||  ||| ||| ||||||  u
       AAAGC  ACU GCU Uauuga  a
UGACCUA     CC   C   U      cu 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_231962: 2841-2896 [-]

Mature hpo-miR-10123-5p

• Accession: MIMAT0040825
• Description: Heligmosomoides polygyrus hpo-miR-10123-5p mature miRNA
• Sequence: 1 - UUUCGAAUGAUCGACAUAACUC - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10123-3p

• Accession: MIMAT0040826
• Description: Heligmosomoides polygyrus hpo-miR-10123-3p mature miRNA
• Sequence: 34 - UUUCGCUCACCCGAAAAUCCAGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488