Stem-loop hpo-mir-10111

Accession

MI0032859

Description

Heligmosomoides polygyrus hpo-mir-10111 precursor miRNA

Sequence

aaggccagugGUAGAGCAAUUAUUGUCGGGCUCGccggagaaucgucguagucccgcGGGAUCUGAUCGAGGCGCUCCAcagccuggga
.((((..((((.((.((..((...(((((((((((.(((..((....))..))).))))).)))))).)).)).)))))).))))....

Structure

---a    ca    U  A  AA  AUU      -     c   ga  c 
    aggc  gugG AG GC  UU   GUCGGG CUCGc gga  au g
    ||||  |||| || ||  ||   |||||| ||||| |||  ||  
    uccg  cACC UC CG  AG   UAGUCU GGGcg ccu  ug u
aggg    -a    -  G  -G  --C      A     c   ga  c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_77272: 73-161 [+]

Mature hpo-miR-10111-5p

• Accession: MIMAT0040801
• Description: Heligmosomoides polygyrus hpo-miR-10111-5p mature miRNA
• Sequence: 11 - GUAGAGCAAUUAUUGUCGGGCUCG - 34
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10111-3p

• Accession: MIMAT0040802
• Description: Heligmosomoides polygyrus hpo-miR-10111-3p mature miRNA
• Sequence: 58 - GGGAUCUGAUCGAGGCGCUCCA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488