Stem-loop hpo-mir-10109

Accession

MI0032857

Description

Heligmosomoides polygyrus hpo-mir-10109 precursor miRNA

Sequence

CGUGGGAGGGUUCUGACUAGGGgacuauccacgaggguucccCUAGUCACAUCCUUCCCUCGAU
((.(((((((...(((((((((((..((((....)))))))))))))))...))))))).))..

Structure

--  U       UUC           cu    a 
  CG GGGAGGG   UGACUAGGGga  aucc c
  || |||||||   |||||||||||  ||||  
  GC CCCUUCC   ACUGAUCcccu  uggg g
UA  U       UAC           --    a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_216268: 464-527 [+]

Mature hpo-miR-10109-5p

• Accession: MIMAT0040797
• Description: Heligmosomoides polygyrus hpo-miR-10109-5p mature miRNA
• Sequence: 1 - CGUGGGAGGGUUCUGACUAGGG - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10109-3p

• Accession: MIMAT0040798
• Description: Heligmosomoides polygyrus hpo-miR-10109-3p mature miRNA
• Sequence: 43 - CUAGUCACAUCCUUCCCUCGAU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488