Stem-loop hpo-mir-10108

Accession

MI0032856

Description

Heligmosomoides polygyrus hpo-mir-10108 precursor miRNA

Sequence

agGUUCGAUCGCAAAGGCCCAACGUagguuucccuacGCUGAACCUCGGCUCGAUGCACCA
.(((((((..((..(((..((.((((((....)))))).))..)))..))))))...))).

Structure

a   ---    UC  AA   CC  A      u 
 gGU   UCGA  GC  AGG  CA CGUagg u
 |||   ||||  ||  |||  || ||||||  
 CCA   AGCU  CG  UCC  GU Gcaucc u
A   CGU    --  GC   AA  C      c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_74778: 1-61 [+]

Mature hpo-miR-10108-5p

• Accession: MIMAT0040795
• Description: Heligmosomoides polygyrus hpo-miR-10108-5p mature miRNA
• Sequence: 3 - GUUCGAUCGCAAAGGCCCAACGU - 25
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10108-3p

• Accession: MIMAT0040796
• Description: Heligmosomoides polygyrus hpo-miR-10108-3p mature miRNA
• Sequence: 38 - GCUGAACCUCGGCUCGAUGCACCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488