Stem-loop hpo-mir-10106

Accession

MI0032854

Description

Heligmosomoides polygyrus hpo-mir-10106 precursor miRNA

Sequence

GUAAAGCUACAGUUCGGACUUCUugaaacacuuggcccuccggggcuucaaguGCAGCGAGCAUGUAGUACGAGU
.....(((((((((((.....(((((.......(((((....)))))))))).....))))).))))))......

Structure

-GUAAA      -     GACUU     aacacuu     u 
      GCUACA GUUCG     CUuga       ggccc c
      |||||| |||||     |||||       |||||  
      UGAUGU CGAGC     gaacu       ucggg c
UGAGCA      A     GACGu     -------     g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_69345: 36-110 [+]

Mature hpo-miR-10106-5p

• Accession: MIMAT0040791
• Description: Heligmosomoides polygyrus hpo-miR-10106-5p mature miRNA
• Sequence: 1 - GUAAAGCUACAGUUCGGACUUCU - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10106-3p

• Accession: MIMAT0040792
• Description: Heligmosomoides polygyrus hpo-miR-10106-3p mature miRNA
• Sequence: 54 - GCAGCGAGCAUGUAGUACGAGU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488