Stem-loop hpo-mir-10104

Accession

MI0032851

Description

Heligmosomoides polygyrus hpo-mir-10104 precursor miRNA

Sequence

CGGGUUUAUAGUGUCAAGCUGGAaguggacggcUAUUCACAUCAUAAACCCGCCACC
(((((((((.((((..(((((........)))))....)))).))))))))).....

Structure

-----         A    --CA     GAa 
     CGGGUUUAU GUGU    AGCUG   g
     ||||||||| ||||    |||||    
     GCCCAAAUA UACA    Ucggc   u
CCACC         C    CUUA     agg 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_341617: 565-621 [+]

Mature hpo-miR-10104-5p

• Accession: MIMAT0040785
• Description: Heligmosomoides polygyrus hpo-miR-10104-5p mature miRNA
• Sequence: 1 - CGGGUUUAUAGUGUCAAGCUGGA - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10104-3p

• Accession: MIMAT0040786
• Description: Heligmosomoides polygyrus hpo-miR-10104-3p mature miRNA
• Sequence: 34 - UAUUCACAUCAUAAACCCGCCACC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488