Stem-loop hpo-mir-10100

Accession

MI0032845

Description

Heligmosomoides polygyrus hpo-mir-10100 precursor miRNA

Sequence

uuuaacaagcGUAACUCCCGGAGGUGAUAGCagguauuuuuaaggcgauagcacggCUGCUAUCCCGGAUGUUUACGUgcgucuguuc
....((..(((((((..((((....((((((((.(.........((....))..).))))))))))))..).))))))..))......

Structure

--uuua  aa      - UC    AGGU        g auuuuuaag  g 
      ac  gcGUAA C  CCGG    GAUAGCag u         gc a
      ||  |||||| |  ||||    |||||||| |         ||  
      ug  UGCAUU G  GGCC    CUAUCGUC g         cg u
cuuguc  cg      U UA    ----        g -------ca  a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_234068: 132-219 [+]

Mature hpo-miR-10100-5p

• Accession: MIMAT0040773
• Description: Heligmosomoides polygyrus hpo-miR-10100-5p mature miRNA
• Sequence: 11 - GUAACUCCCGGAGGUGAUAGC - 31
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10100-3p

• Accession: MIMAT0040774
• Description: Heligmosomoides polygyrus hpo-miR-10100-3p mature miRNA
• Sequence: 57 - CUGCUAUCCCGGAUGUUUACGU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488