Stem-loop hpo-mir-10098b

Accession

MI0032843

Description

Heligmosomoides polygyrus hpo-mir-10098b precursor miRNA

Sequence

CGUAUCCACGAUCCAUUGCUGAcuuuuaggaacagCCAUGGCUCAGGAGCGCUAGA
(((.(((..((.((((.((((...........)))).)))).)).)))))).....

Structure

-----   A   AC  U    U    Acuu 
     CGU UCC  GA CCAU GCUG    u
     ||| |||  || |||| ||||    u
     GCG AGG  CU GGUA Cgac    a
AGAUC   -   -A  C    C    aagg 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_110342: 93-148 [+]

Mature hpo-miR-10098b-5p

• Accession: MIMAT0040769
• Description: Heligmosomoides polygyrus hpo-miR-10098b-5p mature miRNA
• Sequence: 1 - CGUAUCCACGAUCCAUUGCUGA - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10098b-3p

• Accession: MIMAT0040770
• Description: Heligmosomoides polygyrus hpo-miR-10098b-3p mature miRNA
• Sequence: 36 - CCAUGGCUCAGGAGCGCUAGA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488