Stem-loop hpo-mir-5898

Accession

MI0032832

Description

Heligmosomoides polygyrus hpo-mir-5898 precursor miRNA

Sequence

UUUUGAUUGUUACUAAACUACUGUCcuguucauacgaCAGUUUAGAACAAUCGAAGCC
(((((((((((.((((...((((((..((....)))))))))))))))))))))))..

Structure

--           A    ACU      cu  u 
  UUUUGAUUGUU CUAA   ACUGUC  gu c
  ||||||||||| ||||   ||||||  ||  
  GAAGCUAACAA GAUU   UGACag  ca a
CC           -    ---      --  u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_148714: 683-740 [-]

Mature hpo-miR-5898-5p

• Accession: MIMAT0040747
• Description: Heligmosomoides polygyrus hpo-miR-5898-5p mature miRNA
• Sequence: 1 - UUUUGAUUGUUACUAAACUACUGUC - 25
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-5898-3p

• Accession: MIMAT0040748
• Description: Heligmosomoides polygyrus hpo-miR-5898-3p mature miRNA
• Sequence: 38 - CAGUUUAGAACAAUCGAAGCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488